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Freed-Pastor Lab Protocols, Resources and Reagents

 

Code (GitHub):

Immunopeptidomic analysis

Neoepitope predictions

 

For all published plasmids, please visit the Freed-Pastor Lab Addgene Repository

 

Genomic Data (dbGaP): 

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs003887.v1.p1

 

Proteomic Data (MassIVE)

https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=a1403c8adf28494ab89e1d12570cfbc1

 

To request organoids, mice, plasmids, please contact: william_freed-pastor@dfci.harvard.edu